Format Conversion

Convert between formats such as. fasta. gff, Genbank, fna,. faa, etc.

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Type III Secretion System Prediction
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upload protein sequences (.faa) in FASTA format to start the analysis.
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Application Information

EffectiveT3 software was used to identify and predict type III secretion systems by scoring each amino acid sequence according to an in-house specific computational model

Reference

如果您在研究中使用了本工具,请在文章中 引用下列文章:

TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.

Eichinger V, Nussbaumer T, Platzer A, Jehl MA, Arnold R, Rattei T. EffectiveDB--updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems. Nucleic Acids Res. 2016;44(D1):D669-D674. doi:10.1093/nar/gkv1269

Arnold R, Brandmaier S, Kleine F, et al. Sequence-based prediction of type III secreted proteins [published correction appears in PLoS Pathog. 2009 Apr;5(4). doi: 10.1371/annotation/78659a32-7869-4b14-91a6-b301a588d937]. PLoS Pathog. 2009;5(4):e1000376. doi:10.1371/journal.ppat.1000376