Format Conversion

Convert between formats such as. fasta. gff, Genbank, fna,. faa, etc.

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Pneumococcal Sequence Cluster analysis
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Drop files here or click to upload

Please note that uploaded files must inFASTA format, and file suffixes only accept.fna, .fa, .fasta.
Upload DNA sequence file(s) in FASTA format to start the analysis
Application Information
More Info

Global Pneumococcal Sequence Cluster (GPSC) is an international genomic definition of a pneumococcal lineage defined using the clustering software PopPUNK

Reference

如果您在研究中使用了本工具，请在文章中 引用下列文章:

TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.

Lees JA, Harris SR, Tonkin-Hill G, et al. Fast and flexible bacterial genomic epidemiology with PopPUNK. Genome Res. 2019;29(2):304-316. doi:10.1101/gr.241455.118

Subramanian K, Henriques-Normark B, Normark S. Emerging concepts in the pathogenesis of the Streptococcus pneumoniae: From nasopharyngeal colonizer to intracellular pathogen. Cell Microbiol. 2019;21(11):e13077. doi:10.1111/cmi.13077

Lo SW, Gladstone RA, van Tonder AJ, et al. Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study. Lancet Infect Dis. 2019;19(7):759-769. doi:10.1016/S1473-3099(19)30297-X