Format Conversion

Convert between formats such as. fasta. gff, Genbank, fna,. faa, etc.

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Shigella Serotype Prediction
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Drop files here or click to upload

Please note that uploaded files must inFASTA format, and file suffixes only accept.fna, .fa, .fasta.

Upload DNA sequence file(s) in FASTA format to start the analysis
Application Information

Serotype prediction based on their surface antigens, such as O, H, and K antigens.

Reference

如果您在研究中使用了本工具,请在文章中 引用下列文章:

TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.

Yassine I, Lefèvre S, Hansen EE, et al. Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing. Nat Commun. 2022;13(1):551. Published 2022 Jan 27. doi:10.1038/s41467-022-28121-1

Wu Y, Lau HK, Lee T, Lau DK, Payne J. In Silico Serotyping Based on Whole-Genome Sequencing Improves the Accuracy of Shigella Identification. Appl Environ Microbiol. 2019;85(7):e00165-19. Published 2019 Mar 22. doi:10.1128/AEM.00165-19

Wei Xiaoyu, You Li, Tian Kecheng, et al. Detection and analysis of virulence-related genes in *Shigella* strains isolated in Guizhou Province from 2007 to 2013 [J]. Modern Preventive Medicine, 2015, 42(21): 3935-3938