Convert between formats such as. fasta. gff, Genbank, fna,. faa, etc.
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Serotype prediction based on their surface antigens, such as O, H, and K antigens.
如果您在研究中使用了本工具,请在文章中 引用下列文章:
TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.
Han D, Yu F, Tang H, et al. Spreading of Pandemic Vibrio parahaemolyticus O3:K6 and Its Serovariants: A Re-analysis of Strains Isolated from Multiple Studies. Front Cell Infect Microbiol. 2017;7:188. Published 2017 May 18. doi:10.3389/fcimb.2017.00188
Zhao L, Chen H, Didelot X, et al. Co-existence of multiple distinct lineages in Vibrio parahaemolyticus serotype O4:K12. Microb Genom. 2020;6(12):mgen000287. doi:10.1099/mgen.0.000287
Wyres KL, Cahill SM, Holt KE, Hall RM, Kenyon JJ. Identification of Acinetobacter baumannii loci for capsular polysaccharide (KL) and lipooligosaccharide outer core (OCL) synthesis in genome assemblies using curated reference databases compatible with Kaptive. Microb Genom. 2020;6(3):e000339. doi:10.1099/mgen.0.000339
Lam MMC, Wick RR, Judd LM, Holt KE, Wyres KL. Kaptive 2.0: updated capsule and lipopolysaccharide locus typing for the Klebsiella pneumoniae species complex. Microb Genom. 2022;8(3):000800. doi:10.1099/mgen.0.000800
van der Graaf-van Bloois L, Chen H, Wagenaar JA, Zomer AL. Development of Kaptive databases for Vibrio parahaemolyticus O- and K-antigen genotyping. Microb Genom. 2023;9(5):mgen001007. doi:10.1099/mgen.0.001007
Bian S, Jia Y, Zhan Q, et al. VPsero: Rapid Serotyping of Vibrio parahaemolyticus Using Serogroup-Specific Genes Based on Whole-Genome Sequencing Data. Front Microbiol. 2021;12:620224. Published 2021 Sep 2. doi:10.3389/fmicb.2021.620224